Pesquisa | BVS Doenças Infecciosas e Parasitárias

1.

Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution.

Yang, Dian; Jones, Matthew G; Naranjo, Santiago; Rideout, William M; Min, Kyung Hoi Joseph; Ho, Raymond; Wu, Wei; Replogle, Joseph M; Page, Jennifer L; Quinn, Jeffrey J; Horns, Felix; Qiu, Xiaojie; Chen, Michael Z; Freed-Pastor, William A; McGinnis, Christopher S; Patterson, David M; Gartner, Zev J; Chow, Eric D; Bivona, Trever G; Chan, Michelle M; Yosef, Nir; Jacks, Tyler; Weissman, Jonathan S.

Cell ; 185(11): 1905-1923.e25, 2022 05 26.

Artigo em Inglês | MEDLINE | ID: mdl-35523183

2.

A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination.

Taylor, Marcus J; Husain, Kabir; Gartner, Zev J; Mayor, Satyajit; Vale, Ronald D.

Cell ; 169(1): 108-119.e20, 2017 03 23.

Artigo em Inglês | MEDLINE | ID: mdl-28340336

3.

A Mechanogenetic Toolkit for Interrogating Cell Signaling in Space and Time.

Seo, Daeha; Southard, Kaden M; Kim, Ji-Wook; Lee, Hyun Jung; Farlow, Justin; Lee, Jung-Uk; Litt, David B; Haas, Thomas; Alivisatos, A Paul; Cheon, Jinwoo; Gartner, Zev J; Jun, Young-Wook.

Cell ; 165(6): 1507-1518, 2016 Jun 02.

Artigo em Inglês | MEDLINE | ID: mdl-27180907

4.

A Mechanogenetic Toolkit for Interrogating Cell Signaling in Space and Time.

Seo, Daeha; Southard, Kaden M; Kim, Ji-Wook; Lee, Hyun Jung; Farlow, Justin; Lee, Jung-Uk; Litt, David B; Haas, Thomas; Alivisatos, A Paul; Cheon, Jinwoo; Gartner, Zev J; Jun, Young-Wook.

Cell ; 169(7): 1357, 2017 06 15.

Artigo em Inglês | MEDLINE | ID: mdl-28622515

5.

Loss of PPARÎ³ activity characterizes early protumorigenic stromal reprogramming and dictates the therapeutic window of opportunity.

Caruso, Joseph A; Wang, Xianhong; Murrow, Lyndsay M; Rodriguez, Carlos Ivan; Chen-Tanyolac, Chira; Vu, Lisa; Chen, Yunn-Yi; Gascard, Philippe; Gartner, Zev J; Kerlikowske, Karla; Tlsty, Thea D.

Proc Natl Acad Sci U S A ; 120(42): e2303774120, 2023 10 17.

Artigo em Inglês | MEDLINE | ID: mdl-37816052

6.

Bisphenol A replacement chemicals, BPF and BPS, induce protumorigenic changes in human mammary gland organoid morphology and proteome.

Winkler, Juliane; Liu, Pengyuan; Phong, Kiet; Hinrichs, Johanna H; Ataii, Nassim; Williams, Katherine; Hadler-Olsen, Elin; Samson, Susan; Gartner, Zev J; Fisher, Susan; Werb, Zena.

Proc Natl Acad Sci U S A ; 119(11): e2115308119, 2022 03 15.

Artigo em Inglês | MEDLINE | ID: mdl-35263230

7.

Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.

Su-Feher, Linda; Rubin, Anna N; Silberberg, Shanni N; Catta-Preta, Rinaldo; Lim, Kenneth J; Ypsilanti, Athena R; Zdilar, Iva; McGinnis, Christopher S; McKinsey, Gabriel L; Rubino, Thomas E; Hawrylycz, Michael J; Thompson, Carol; Gartner, Zev J; Puelles, Luis; Zeng, Hongkui; Rubenstein, John L R; Nord, Alex S.

Proc Natl Acad Sci U S A ; 119(15): e2108760119, 2022 04 12.

Artigo em Inglês | MEDLINE | ID: mdl-35377797

8.

ZipSeq: barcoding for real-time mapping of single cell transcriptomes.

Hu, Kenneth H; Eichorst, John P; McGinnis, Chris S; Patterson, David M; Chow, Eric D; Kersten, Kelly; Jameson, Stephen C; Gartner, Zev J; Rao, Arjun A; Krummel, Matthew F.

Nat Methods ; 17(8): 833-843, 2020 08.

Artigo em Inglês | MEDLINE | ID: mdl-32632238

9.

Expanding the boundaries of synthetic development.

Martyn, Iain; Gartner, Zev J.

Dev Biol ; 474: 62-70, 2021 06.

Artigo em Inglês | MEDLINE | ID: mdl-33587913

10.

MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices.

McGinnis, Christopher S; Patterson, David M; Winkler, Juliane; Conrad, Daniel N; Hein, Marco Y; Srivastava, Vasudha; Hu, Jennifer L; Murrow, Lyndsay M; Weissman, Jonathan S; Werb, Zena; Chow, Eric D; Gartner, Zev J.

Nat Methods ; 16(7): 619-626, 2019 07.

Artigo em Inglês | MEDLINE | ID: mdl-31209384

11.

No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells.

McGinnis, Christopher S; Siegel, David A; Xie, Guorui; Hartoularos, George; Stone, Mars; Ye, Chun J; Gartner, Zev J; Roan, Nadia R; Lee, Sulggi A.

BMC Biol ; 19(1): 10, 2021 01 20.

Artigo em Inglês | MEDLINE | ID: mdl-33472616

12.

Quanti.us: a tool for rapid, flexible, crowd-based annotation of images.

Hughes, Alex J; Mornin, Joseph D; Biswas, Sujoy K; Beck, Lauren E; Bauer, David P; Raj, Arjun; Bianco, Simone; Gartner, Zev J.

Nat Methods ; 15(8): 587-590, 2018 08.

Artigo em Inglês | MEDLINE | ID: mdl-30065368

13.

Roadmap for the multiscale coupling of biochemical and mechanical signals during development.

Lenne, Pierre-François; Munro, Edwin; Heemskerk, Idse; Warmflash, Aryeh; Bocanegra-Moreno, Laura; Kishi, Kasumi; Kicheva, Anna; Long, Yuchen; Fruleux, Antoine; Boudaoud, Arezki; Saunders, Timothy E; Caldarelli, Paolo; Michaut, Arthur; Gros, Jerome; Maroudas-Sacks, Yonit; Keren, Kinneret; Hannezo, Edouard; Gartner, Zev J; Stormo, Benjamin; Gladfelter, Amy; Rodrigues, Alan; Shyer, Amy; Minc, Nicolas; Maître, Jean-Léon; Di Talia, Stefano; Khamaisi, Bassma; Sprinzak, David; Tlili, Sham.

Phys Biol ; 18(4)2021 04 14.

Artigo em Inglês | MEDLINE | ID: mdl-33276350

14.

Paracrine costimulation of IFN-Î³ signaling by integrins modulates CD8 T cell differentiation.

Krummel, Matthew F; Mahale, Jagdish N; Uhl, Lion F K; Hardison, Emily A; Mujal, Adriana M; Mazet, Julie M; Weber, Robert J; Gartner, Zev J; Gérard, Audrey.

Proc Natl Acad Sci U S A ; 115(45): 11585-11590, 2018 11 06.

Artigo em Inglês | MEDLINE | ID: mdl-30348790

15.

Dissecting the stem cell niche with organoid models: an engineering-based approach.

Murrow, Lyndsay M; Weber, Robert J; Gartner, Zev J.

Development ; 144(6): 998-1007, 2017 03 15.

Artigo em Inglês | MEDLINE | ID: mdl-28292846

16.

Printed droplet microfluidics for on demand dispensing of picoliter droplets and cells.

Cole, Russell H; Tang, Shi-Yang; Siltanen, Christian A; Shahi, Payam; Zhang, Jesse Q; Poust, Sean; Gartner, Zev J; Abate, Adam R.

Proc Natl Acad Sci U S A ; 114(33): 8728-8733, 2017 08 15.

Artigo em Inglês | MEDLINE | ID: mdl-28760972

17.

Programmed synthesis of three-dimensional tissues.

Todhunter, Michael E; Jee, Noel Y; Hughes, Alex J; Coyle, Maxwell C; Cerchiari, Alec; Farlow, Justin; Garbe, James C; LaBarge, Mark A; Desai, Tejal A; Gartner, Zev J.

Nat Methods ; 12(10): 975-81, 2015 Oct.

Artigo em Inglês | MEDLINE | ID: mdl-26322836

18.

A strategy for tissue self-organization that is robust to cellular heterogeneity and plasticity.

Cerchiari, Alec E; Garbe, James C; Jee, Noel Y; Todhunter, Michael E; Broaders, Kyle E; Peehl, Donna M; Desai, Tejal A; LaBarge, Mark A; Thomson, Matthew; Gartner, Zev J.

Proc Natl Acad Sci U S A ; 112(7): 2287-92, 2015 Feb 17.

Artigo em Inglês | MEDLINE | ID: mdl-25633040

19.

Guiding tissue-scale self-organization.

Gartner, Zev J; Hu, Jennifer L.

Nat Mater ; 20(1): 2-3, 2021 01.

Artigo em Inglês | MEDLINE | ID: mdl-33340008

20.

Formation of targeted monovalent quantum dots by steric exclusion.

Farlow, Justin; Seo, Daeha; Broaders, Kyle E; Taylor, Marcus J; Gartner, Zev J; Jun, Young-Wook.

Nat Methods ; 10(12): 1203-5, 2013 Dec.

Artigo em Inglês | MEDLINE | ID: mdl-24122039

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Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution.

A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination.

A Mechanogenetic Toolkit for Interrogating Cell Signaling in Space and Time.

A Mechanogenetic Toolkit for Interrogating Cell Signaling in Space and Time.

Loss of PPARÎ³ activity characterizes early protumorigenic stromal reprogramming and dictates the therapeutic window of opportunity.

Bisphenol A replacement chemicals, BPF and BPS, induce protumorigenic changes in human mammary gland organoid morphology and proteome.

Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.

ZipSeq: barcoding for real-time mapping of single cell transcriptomes.

Expanding the boundaries of synthetic development.

MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices.

No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells.

Quanti.us: a tool for rapid, flexible, crowd-based annotation of images.

Roadmap for the multiscale coupling of biochemical and mechanical signals during development.

Paracrine costimulation of IFN-Î³ signaling by integrins modulates CD8 T cell differentiation.

Dissecting the stem cell niche with organoid models: an engineering-based approach.

Printed droplet microfluidics for on demand dispensing of picoliter droplets and cells.

Programmed synthesis of three-dimensional tissues.

A strategy for tissue self-organization that is robust to cellular heterogeneity and plasticity.

Guiding tissue-scale self-organization.

Formation of targeted monovalent quantum dots by steric exclusion.